There is easier way of  pointing agent to new oms in 11g.

Go the $AGENT_HOME/bin and execute just one command,

$ ./emctl switchOMS https://oms_hostname:1159/em/upload
Oracle Enterprise Manager 11g Release 1 Grid Control 11.1.0.1.0
Copyright (c) 1996, 2010 Oracle Corporation.  All rights reserved.
SwitchOMS succeeded.

If you have agent registration passwd enabled, do the below steps,

$./emctl stop agent

$./emctl secure agent ‘pwd’

$./emctl start agent

Before 11g, you will have to follow steps given metalink#413228.1

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